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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBAKRB associated KRAB zinc finger. (706 aa)    
Predicted Functional Partners:
G1PBB6_MYOLU
Uncharacterized protein.
    
  0.763
BSND
Barttin CLCNK type accessory beta subunit.
      
 0.734
TADA1
Transcriptional adaptor 1.
    
 
 0.729
CARTPT
CART prepropeptide.
    
 
 0.697
BBX
BBX high mobility group box domain containing.
    
 
 0.661
PHTF1
Putative homeodomain transcription factor 1.
    
 
 0.627
G1PZQ6_MYOLU
Uncharacterized protein.
    
  0.627
TENT4A
Terminal nucleotidyltransferase 4A.
      
 0.625
EPC2
Enhancer of polycomb homolog.
    
 
 0.618
THAP7
THAP domain containing 7.
    
 0.614
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.