STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC39ATetratricopeptide repeat domain 39A. (578 aa)    
Predicted Functional Partners:
NIPAL2
NIPA like domain containing 2.
      
 0.699
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
      
 0.614
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.614
PPM1H
Protein phosphatase, Mg2+/Mn2+ dependent 1H.
      
 0.614
CTDSPL
CTD small phosphatase like.
      
 0.612
DCAF5
DDB1 and CUL4 associated factor 5.
      
 0.612
SLC44A1
Solute carrier family 44 member 1; Belongs to the CTL (choline transporter-like) family.
      
 0.612
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
      
 0.573
ST6GALNAC4
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.570
G1QF63_MYOLU
Uncharacterized protein.
      
 0.570
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.