Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRPK3SRSF protein kinase 3. (565 aa)    
Predicted Functional Partners:
SRSF1
Uncharacterized protein.
    
 
 0.880
G1PHC6_MYOLU
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.872
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 
 0.834
SRSF2
RRM domain-containing protein.
   
 
 0.824
PRPF38A
PRP38_assoc domain-containing protein.
    
 
 0.823
RBM39
RNA binding motif protein 39.
    
 
 0.812
RBM23
RNA binding motif protein 23.
    
 
 0.812
ACIN1
Apoptotic chromatin condensation inducer 1.
    
 
 0.807
SRSF5
Serine and arginine rich splicing factor 5.
    
 
 0.805
SNRNP27
Small nuclear ribonucleoprotein U4/U6.U5 subunit 27.
    
 
 0.799
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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