G1P2G6_MYOLU protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G1P2G6_MYOLU

t-SNARE coiled-coil homology domain-containing protein. (118 aa)

Predicted Functional Partners:

SCFD1

0.999

GOSR1

0.999

STX5

0.999

G1NYH3_MYOLU

0.998

G1Q0Y2_MYOLU

0.998

G1QDW6_MYOLU

0.998

USO1

0.996

SEC22B

0.996

VAMP8

0.995

G1P4U9_MYOLU

0.993

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1NYH3_MYOLU	G1P2G6_MYOLU	ENSMLUP00000002463	ENSMLUP00000004055	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	t-SNARE coiled-coil homology domain-containing protein.	0.998
G1NYH3_MYOLU	G1P4U9_MYOLU	ENSMLUP00000002463	ENSMLUP00000004998	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.958
G1NYH3_MYOLU	GOSR1	ENSMLUP00000002463	ENSMLUP00000002339	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.997
G1NYH3_MYOLU	SCFD1	ENSMLUP00000002463	ENSMLUP00000000504	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	0.996
G1NYH3_MYOLU	SEC22B	ENSMLUP00000002463	ENSMLUP00000021039	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	0.992
G1NYH3_MYOLU	STX5	ENSMLUP00000002463	ENSMLUP00000010187	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	Syntaxin 5; Belongs to the syntaxin family.	0.996
G1NYH3_MYOLU	USO1	ENSMLUP00000002463	ENSMLUP00000014851	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	USO1 vesicle transport factor.	0.974
G1NYH3_MYOLU	VAMP8	ENSMLUP00000002463	ENSMLUP00000004890	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	Vesicle associated membrane protein 8.	0.468
G1P2G6_MYOLU	G1NYH3_MYOLU	ENSMLUP00000004055	ENSMLUP00000002463	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.998
G1P2G6_MYOLU	G1P4U9_MYOLU	ENSMLUP00000004055	ENSMLUP00000004998	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.993
G1P2G6_MYOLU	G1Q0Y2_MYOLU	ENSMLUP00000004055	ENSMLUP00000017365	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.998
G1P2G6_MYOLU	G1QDW6_MYOLU	ENSMLUP00000004055	ENSMLUP00000021899	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.998
G1P2G6_MYOLU	GOSR1	ENSMLUP00000004055	ENSMLUP00000002339	t-SNARE coiled-coil homology domain-containing protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.999
G1P2G6_MYOLU	SCFD1	ENSMLUP00000004055	ENSMLUP00000000504	t-SNARE coiled-coil homology domain-containing protein.	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.	0.999
G1P2G6_MYOLU	SEC22B	ENSMLUP00000004055	ENSMLUP00000021039	t-SNARE coiled-coil homology domain-containing protein.	SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.	0.996
G1P2G6_MYOLU	STX5	ENSMLUP00000004055	ENSMLUP00000010187	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin 5; Belongs to the syntaxin family.	0.999
G1P2G6_MYOLU	USO1	ENSMLUP00000004055	ENSMLUP00000014851	t-SNARE coiled-coil homology domain-containing protein.	USO1 vesicle transport factor.	0.996
G1P2G6_MYOLU	VAMP8	ENSMLUP00000004055	ENSMLUP00000004890	t-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 8.	0.995
G1P4U9_MYOLU	G1NYH3_MYOLU	ENSMLUP00000004998	ENSMLUP00000002463	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.958
G1P4U9_MYOLU	G1P2G6_MYOLU	ENSMLUP00000004998	ENSMLUP00000004055	Uncharacterized protein; Belongs to the synaptobrevin family.	t-SNARE coiled-coil homology domain-containing protein.	0.993