STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRX1Paired related homeobox 1. (247 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.807
LDB2
LIM domain binding 2.
    
 0.688
LDB1
LIM domain binding 1.
    
 0.688
G1Q0P6_MYOLU
OAR domain-containing protein.
     
 0.681
FOXN4
Forkhead box N4.
   
 
 0.670
LHX4
LIM homeobox 4.
   
0.656
TWIST1
Twist family bHLH transcription factor 1.
   
  
 0.632
TWIST2
Twist family bHLH transcription factor 2.
   
  
 0.574
HAND2
Heart and neural crest derivatives expressed 2.
    
 0.570
HAND1
Heart and neural crest derivatives expressed 1.
   
 0.569
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.