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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEDDDeath effector domain containing. (318 aa)    
Predicted Functional Partners:
PNLDC1
PARN like, ribonuclease domain containing 1.
      
 0.681
PARN
Poly(A)-specific ribonuclease.
      
 0.677
ERI1
Exoribonuclease 1.
      
 0.573
DCP1B
Decapping mRNA 1B.
      
 0.568
ZNHIT2
Zinc finger HIT-type containing 2.
      
 0.534
CNOT6L
CCR4-NOT transcription complex subunit 6 like.
      
 0.483
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
  
 0.477
ZNF24
Zinc finger protein 24.
      
 0.475
CNOT6
CCR4-NOT transcription complex subunit 6.
      
 0.474
CNOT8
CCR4-NOT transcription complex subunit 8.
      
 0.473
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.