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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNDIG1LSynapse differentiation inducing 1 like. (195 aa)    
Predicted Functional Partners:
TMEM108
Uncharacterized protein.
      
 0.753
LARP1B
La ribonucleoprotein domain family member 1B.
      
 0.702
TMEM233
Transmembrane protein 233.
      
 0.687
PROX2
Prospero homeobox 2.
      
 0.676
RIPPLY2
Ripply transcriptional repressor 2.
      
 0.675
ANKRD13B
Ankyrin repeat domain 13B.
      
 0.657
CACNA1F
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
  
 0.647
JAZF1
JAZF zinc finger 1.
      
 0.645
HEATR4
HEAT repeat containing 4.
      
 0.627
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.599
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.