STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN10Calpain 10; Belongs to the peptidase C2 family. (670 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
    
 0.916
CAPNS1
Calpain small subunit 1.
 
 
 0.899
PEF1
Penta-EF-hand domain containing 1.
   
 0.692
GCA
Grancalcin.
   
 0.692
SRI
Sorcin.
   
 0.692
G1Q5Z9_MYOLU
Uncharacterized protein.
   
 0.692
ITSN2
Intersectin 2.
   
 
  0.677
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.668
CLYBL
Citrate lyase beta like.
   
  
 0.612
LRRC52
Leucine rich repeat containing 52.
    
 
 0.585
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.