STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF326Zinc finger protein 326; Belongs to the AKAP95 family. (572 aa)    
Predicted Functional Partners:
MATR3
Uncharacterized protein.
  
 
 0.760
RBM23
RNA binding motif protein 23.
   
 
 0.697
WDR77
WD repeat domain 77.
    
 
 0.682
HNRNPC
RRM domain-containing protein.
   
 
 0.675
SMYD5
SMYD family member 5.
      
 0.673
RBM39
RNA binding motif protein 39.
   
 
 0.660
CPSF7
Cleavage and polyadenylation specific factor 7.
   
 
 0.648
LOC102432271
Uncharacterized protein.
      
 0.645
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.
   
  
 0.637
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
    
 
 0.629
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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