STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DERL3Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (231 aa)    
Predicted Functional Partners:
OS9
OS9 endoplasmic reticulum lectin.
    
 0.982
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
0.982
ERLEC1
Endoplasmic reticulum lectin 1.
    
 0.980
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.978
SYVN1
Synoviolin 1.
   
 0.970
AMFR
Autocrine motility factor receptor.
   
 0.966
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.958
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
   
 0.949
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.941
SEL1L3
SEL1L family member 3.
   
 0.940
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.