SELENON protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SELENON

Selenoprotein N. (497 aa)

Predicted Functional Partners:

SELENOO

0.822

G1QBT0_MYOLU

0.769

SELENOK

0.728

SELENOF

0.728

G1QDH1_MYOLU

0.728

SELENOV

0.682

SELENOI

0.681

TXNRD3

0.680

TXNRD2

0.672

RYR1

0.634

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1QBT0_MYOLU	G1QDH1_MYOLU	ENSMLUP00000021163	ENSMLUP00000021754	Sep15_SelM domain-containing protein.	Uncharacterized protein.	0.682
G1QBT0_MYOLU	SELENOF	ENSMLUP00000021163	ENSMLUP00000013328	Sep15_SelM domain-containing protein.	Selenoprotein F.	0.769
G1QBT0_MYOLU	SELENOI	ENSMLUP00000021163	ENSMLUP00000009188	Sep15_SelM domain-containing protein.	Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.736
G1QBT0_MYOLU	SELENOK	ENSMLUP00000021163	ENSMLUP00000011490	Sep15_SelM domain-containing protein.	Uncharacterized protein.	0.682
G1QBT0_MYOLU	SELENON	ENSMLUP00000021163	ENSMLUP00000004636	Sep15_SelM domain-containing protein.	Selenoprotein N.	0.769
G1QBT0_MYOLU	SELENOO	ENSMLUP00000021163	ENSMLUP00000000400	Sep15_SelM domain-containing protein.	Selenoprotein O.	0.769
G1QBT0_MYOLU	SELENOV	ENSMLUP00000021163	ENSMLUP00000012654	Sep15_SelM domain-containing protein.	Selenoprotein V.	0.685
G1QBT0_MYOLU	TXNRD2	ENSMLUP00000021163	ENSMLUP00000013573	Sep15_SelM domain-containing protein.	Thioredoxin reductase 2.	0.678
G1QBT0_MYOLU	TXNRD3	ENSMLUP00000021163	ENSMLUP00000007230	Sep15_SelM domain-containing protein.	Thioredoxin reductase 3.	0.665
G1QDH1_MYOLU	G1QBT0_MYOLU	ENSMLUP00000021754	ENSMLUP00000021163	Uncharacterized protein.	Sep15_SelM domain-containing protein.	0.682
G1QDH1_MYOLU	SELENOF	ENSMLUP00000021754	ENSMLUP00000013328	Uncharacterized protein.	Selenoprotein F.	0.686
G1QDH1_MYOLU	SELENOI	ENSMLUP00000021754	ENSMLUP00000009188	Uncharacterized protein.	Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.639
G1QDH1_MYOLU	SELENON	ENSMLUP00000021754	ENSMLUP00000004636	Uncharacterized protein.	Selenoprotein N.	0.728
G1QDH1_MYOLU	SELENOO	ENSMLUP00000021754	ENSMLUP00000000400	Uncharacterized protein.	Selenoprotein O.	0.685
G1QDH1_MYOLU	SELENOV	ENSMLUP00000021754	ENSMLUP00000012654	Uncharacterized protein.	Selenoprotein V.	0.758
G1QDH1_MYOLU	TXNRD2	ENSMLUP00000021754	ENSMLUP00000013573	Uncharacterized protein.	Thioredoxin reductase 2.	0.612
G1QDH1_MYOLU	TXNRD3	ENSMLUP00000021754	ENSMLUP00000007230	Uncharacterized protein.	Thioredoxin reductase 3.	0.612
RYR1	SELENON	ENSMLUP00000009236	ENSMLUP00000004636	Ryanodine receptor 1.	Selenoprotein N.	0.634
RYR1	SELENOV	ENSMLUP00000009236	ENSMLUP00000012654	Ryanodine receptor 1.	Selenoprotein V.	0.512
SELENOF	G1QBT0_MYOLU	ENSMLUP00000013328	ENSMLUP00000021163	Selenoprotein F.	Sep15_SelM domain-containing protein.	0.769