Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALKBH1AlkB homolog 1, histone H2A dioxygenase. (389 aa)    
Predicted Functional Partners:
ALKBH5
AlkB homolog 5, RNA demethylase.
      
 0.878
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.875
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.869
ALKBH4
AlkB homolog 4, lysine demethylase.
   
  
 0.846
ALKBH6
AlkB homolog 6.
   
  
 0.835
LOC102441541
2OG-FeII_Oxy_2 domain-containing protein.
      
 0.824
ALKBH8
AlkB homolog 8, tRNA methyltransferase.
      
 0.784
TRMT6
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.715
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.691
TRMT61B
tRNA methyltransferase 61B.
     
 0.689
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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