STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAHPhenylalanine hydroxylase. (455 aa)    
Predicted Functional Partners:
PCBD1
Pterin-4 alpha-carbinolamine dehydratase 1.
  
 0.994
PCBD2
Pterin-4 alpha-carbinolamine dehydratase 2.
  
 0.993
G1PR63_MYOLU
Uncharacterized protein.
  
 
 0.993
QDPR
Quinoid dihydropteridine reductase.
 
 
 0.985
TAT
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
 
 0.981
HGD
Homogentisate 1,2-dioxygenase.
  
  
 0.943
GOT2
Aspartate aminotransferase.
  
 
 0.939
GOT1
Aspartate aminotransferase.
  
 
 0.935
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
  
 
 0.934
DHFR
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
     
 0.924
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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