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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM69Tripartite motif containing 69. (361 aa)    
Predicted Functional Partners:
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.733
TRIM42
Tripartite motif containing 42.
     
 0.683
TRIM23
Tripartite motif containing 23.
    
 
 0.680
TRIM47
Tripartite motif containing 47.
      
 0.679
ICOS
Inducible T cell costimulator.
    
 0.654
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 
 0.649
TRIM54
Tripartite motif containing 54.
    
 
 0.647
TRIM66
Tripartite motif containing 66.
      
 0.634
LOC102431802
Uncharacterized protein.
      
 0.612
GAS7
Growth arrest specific 7.
    
  0.608
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.