THOC3 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

THOC3

WD_REPEATS_REGION domain-containing protein. (351 aa)

Predicted Functional Partners:

THOC1

0.994

THOC6

0.993

THOC5

0.993

THOC2

0.993

G1QCD4_MYOLU

0.993

G1QCE7_MYOLU

0.993

G1QFK8_MYOLU

0.993

G1P0B6_MYOLU

0.988

THOC7

0.988

L7N1H9_MYOLU

0.983

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1P0B6_MYOLU	G1QCD4_MYOLU	ENSMLUP00000003191	ENSMLUP00000021367	Uncharacterized protein.	Uncharacterized protein.	0.978
G1P0B6_MYOLU	G1QCE7_MYOLU	ENSMLUP00000003191	ENSMLUP00000021380	Uncharacterized protein.	Uncharacterized protein.	0.978
G1P0B6_MYOLU	G1QFK8_MYOLU	ENSMLUP00000003191	ENSMLUP00000022491	Uncharacterized protein.	Uncharacterized protein.	0.978
G1P0B6_MYOLU	L7N1H9_MYOLU	ENSMLUP00000003191	ENSMLUP00000008411	Uncharacterized protein.	RRM domain-containing protein.	0.848
G1P0B6_MYOLU	THOC1	ENSMLUP00000003191	ENSMLUP00000003733	Uncharacterized protein.	Death domain-containing protein.	0.985
G1P0B6_MYOLU	THOC2	ENSMLUP00000003191	ENSMLUP00000012446	Uncharacterized protein.	Uncharacterized protein.	0.978
G1P0B6_MYOLU	THOC3	ENSMLUP00000003191	ENSMLUP00000004941	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.988
G1P0B6_MYOLU	THOC5	ENSMLUP00000003191	ENSMLUP00000011072	Uncharacterized protein.	THO complex 5.	0.997
G1P0B6_MYOLU	THOC6	ENSMLUP00000003191	ENSMLUP00000001270	Uncharacterized protein.	THO complex 6.	0.996
G1P0B6_MYOLU	THOC7	ENSMLUP00000003191	ENSMLUP00000010990	Uncharacterized protein.	Uncharacterized protein.	0.543
G1QCD4_MYOLU	G1P0B6_MYOLU	ENSMLUP00000021367	ENSMLUP00000003191	Uncharacterized protein.	Uncharacterized protein.	0.978
G1QCD4_MYOLU	G1QCE7_MYOLU	ENSMLUP00000021367	ENSMLUP00000021380	Uncharacterized protein.	Uncharacterized protein.	0.900
G1QCD4_MYOLU	G1QFK8_MYOLU	ENSMLUP00000021367	ENSMLUP00000022491	Uncharacterized protein.	Uncharacterized protein.	0.900
G1QCD4_MYOLU	L7N1H9_MYOLU	ENSMLUP00000021367	ENSMLUP00000008411	Uncharacterized protein.	RRM domain-containing protein.	0.982
G1QCD4_MYOLU	THOC1	ENSMLUP00000021367	ENSMLUP00000003733	Uncharacterized protein.	Death domain-containing protein.	0.993
G1QCD4_MYOLU	THOC2	ENSMLUP00000021367	ENSMLUP00000012446	Uncharacterized protein.	Uncharacterized protein.	0.900
G1QCD4_MYOLU	THOC3	ENSMLUP00000021367	ENSMLUP00000004941	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
G1QCD4_MYOLU	THOC5	ENSMLUP00000021367	ENSMLUP00000011072	Uncharacterized protein.	THO complex 5.	0.990
G1QCD4_MYOLU	THOC6	ENSMLUP00000021367	ENSMLUP00000001270	Uncharacterized protein.	THO complex 6.	0.988
G1QCD4_MYOLU	THOC7	ENSMLUP00000021367	ENSMLUP00000010990	Uncharacterized protein.	Uncharacterized protein.	0.978