STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM120CFamily with sequence similarity 120C. (1099 aa)    
Predicted Functional Partners:
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
      
 0.552
WNK3
WNK lysine deficient protein kinase 3.
 
 
  
 0.532
EXOSC5
Exosome component 5.
      
 0.514
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.511
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.509
ZNF574
Zinc finger protein 574.
      
 0.487
PHF8
PHD finger protein 8.
   
  
 0.484
ECH1
Enoyl-CoA hydratase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.475
LOC102439636
Tr-type G domain-containing protein.
      
 0.465
SBDS
SBDS ribosome maturation factor.
      
 0.465
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.