KHDRBS2 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FYN	KHDRBS1	ENSMLUP00000006692	ENSMLUP00000007406	Tyrosine-protein kinase.	KH RNA binding domain containing, signal transduction associated 1.	0.950
FYN	KHDRBS2	ENSMLUP00000006692	ENSMLUP00000005005	Tyrosine-protein kinase.	KH RNA binding domain containing, signal transduction associated 2.	0.869
FYN	KHDRBS3	ENSMLUP00000006692	ENSMLUP00000003694	Tyrosine-protein kinase.	KH RNA binding domain containing, signal transduction associated 3.	0.857
G1PYS5_MYOLU	HNRNPR	ENSMLUP00000016607	ENSMLUP00000006921	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein R.	0.982
G1PYS5_MYOLU	KHDRBS1	ENSMLUP00000016607	ENSMLUP00000007406	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 1.	0.975
G1PYS5_MYOLU	KHDRBS2	ENSMLUP00000016607	ENSMLUP00000005005	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 2.	0.856
G1PYS5_MYOLU	KHDRBS3	ENSMLUP00000016607	ENSMLUP00000003694	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 3.	0.899
G1PYS5_MYOLU	RBM3	ENSMLUP00000016607	ENSMLUP00000003639	Uncharacterized protein.	RNA binding motif protein 3.	0.945
G1Q4C6_MYOLU	HNRNPR	ENSMLUP00000018559	ENSMLUP00000006921	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein R.	0.982
G1Q4C6_MYOLU	KHDRBS1	ENSMLUP00000018559	ENSMLUP00000007406	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 1.	0.975
G1Q4C6_MYOLU	KHDRBS2	ENSMLUP00000018559	ENSMLUP00000005005	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 2.	0.856
G1Q4C6_MYOLU	KHDRBS3	ENSMLUP00000018559	ENSMLUP00000003694	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 3.	0.899
G1Q4C6_MYOLU	RBM3	ENSMLUP00000018559	ENSMLUP00000003639	Uncharacterized protein.	RNA binding motif protein 3.	0.945
HNRNPK	HNRNPR	ENSMLUP00000005368	ENSMLUP00000006921	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein R.	0.982
HNRNPK	KHDRBS1	ENSMLUP00000005368	ENSMLUP00000007406	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 1.	0.975
HNRNPK	KHDRBS2	ENSMLUP00000005368	ENSMLUP00000005005	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 2.	0.856
HNRNPK	KHDRBS3	ENSMLUP00000005368	ENSMLUP00000003694	Uncharacterized protein.	KH RNA binding domain containing, signal transduction associated 3.	0.899
HNRNPK	RBM3	ENSMLUP00000005368	ENSMLUP00000003639	Uncharacterized protein.	RNA binding motif protein 3.	0.945
HNRNPR	G1PYS5_MYOLU	ENSMLUP00000006921	ENSMLUP00000016607	Heterogeneous nuclear ribonucleoprotein R.	Uncharacterized protein.	0.982
HNRNPR	G1Q4C6_MYOLU	ENSMLUP00000006921	ENSMLUP00000018559	Heterogeneous nuclear ribonucleoprotein R.	Uncharacterized protein.	0.982