STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102428587BTB domain-containing protein. (608 aa)    
Predicted Functional Partners:
BBS1
BBS1 domain-containing protein.
    
 0.836
BBS9
Bardet-Biedl syndrome 9.
    
 0.834
BBS4
Bardet-Biedl syndrome 4.
    
 0.823
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.800
SQSTM1
Sequestosome 1.
    
 0.780
TTC8
TPR_REGION domain-containing protein.
    
 0.772
LOC102424606
Uncharacterized protein.
    
 0.772
NBR1
NBR1 autophagy cargo receptor.
    
 0.727
UBXN7
UBX domain-containing protein 7.
    
  0.683
ZC3H12C
Zinc finger CCCH-type containing 12C.
   
  
 0.676
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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