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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH17Protocadherin 17. (1158 aa)    
Predicted Functional Partners:
G1QAS9_MYOLU
Uncharacterized protein.
    
 0.658
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.621
CTNND2
Catenin delta 2.
    
 0.619
PKP4
Plakophilin 4.
    
 0.619
TMCC3
Transmembrane and coiled-coil domain family 3.
      
 0.618
UCK2
Uridine-cytidine kinase 2.
    
 0.614
INSYN2A
Inhibitory synaptic factor 2A.
      
 0.612
CTNNB1
Catenin beta 1.
    
 0.612
G1Q5J7_MYOLU
Uncharacterized protein.
    
 
 0.607
UCKL1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.595
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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