STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYPSynaptophysin. (313 aa)    
Predicted Functional Partners:
VAMP1
Vesicle associated membrane protein 1.
   
 0.910
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.905
SYN2
Synapsin II.
   
 
 0.904
RAB3A
RAB3A, member RAS oncogene family.
   
 0.859
SLC17A7
Solute carrier family 17 member 7.
   
 
 0.832
MAP2
Microtubule-associated protein.
   
  
 0.826
SYN1
Synapsin I.
   
 
 0.820
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
  
 0.809
BDNF
Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS.
      
 0.805
SYNGR4
Synaptogyrin 4.
    
 
 0.799
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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