STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYCP1Synaptonemal complex protein 1. (1000 aa)    
Predicted Functional Partners:
HORMAD1
HORMA domain containing 1.
   
 
 0.924
SYCE1
Synaptonemal complex central element protein 1.
    
 0.900
REC8
REC8 meiotic recombination protein.
    
 0.893
SYCP3
Synaptonemal complex protein 3.
    
 0.876
SYCE2
Synaptonemal complex central element protein 2.
    
 0.874
SYCE3
Synaptonemal complex central element protein 3.
    
 0.854
SMC1B
Structural maintenance of chromosomes protein.
    
 0.836
REC114
Uncharacterized protein.
    
 
 0.793
TEX12
Testis expressed 12.
     
 0.784
MEI1
Meiotic double-stranded break formation protein 1.
      
 0.769
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.