PPP1R3F protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PPP1R3F

Protein phosphatase 1 regulatory subunit 3F. (626 aa)

Predicted Functional Partners:

GYS2

0.957

GYS1

0.957

PPP1CB

0.950

PPP1CA

0.950

PPP1R3E

0.948

PPP1CC

0.943

LOC102436383

0.943

PPP1R3A

0.887

PPP1R3B

0.887

PPP1R3C

0.885

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GYS1	GYS2	ENSMLUP00000008476	ENSMLUP00000005260	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.874
GYS1	LOC102436383	ENSMLUP00000008476	ENSMLUP00000019331	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	SER_THR_PHOSPHATASE domain-containing protein.	0.949
GYS1	PPP1CA	ENSMLUP00000008476	ENSMLUP00000004660	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.955
GYS1	PPP1CB	ENSMLUP00000008476	ENSMLUP00000003450	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.955
GYS1	PPP1CC	ENSMLUP00000008476	ENSMLUP00000017684	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.949
GYS1	PPP1R3A	ENSMLUP00000008476	ENSMLUP00000009493	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3A.	0.957
GYS1	PPP1R3B	ENSMLUP00000008476	ENSMLUP00000014704	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit.	0.966
GYS1	PPP1R3C	ENSMLUP00000008476	ENSMLUP00000016482	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.990
GYS1	PPP1R3E	ENSMLUP00000008476	ENSMLUP00000022024	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3E.	0.966
GYS1	PPP1R3F	ENSMLUP00000008476	ENSMLUP00000005227	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3F.	0.957
GYS2	GYS1	ENSMLUP00000005260	ENSMLUP00000008476	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.874
GYS2	LOC102436383	ENSMLUP00000005260	ENSMLUP00000019331	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	SER_THR_PHOSPHATASE domain-containing protein.	0.949
GYS2	PPP1CA	ENSMLUP00000005260	ENSMLUP00000004660	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.959
GYS2	PPP1CB	ENSMLUP00000005260	ENSMLUP00000003450	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.955
GYS2	PPP1CC	ENSMLUP00000005260	ENSMLUP00000017684	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.949
GYS2	PPP1R3A	ENSMLUP00000005260	ENSMLUP00000009493	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3A.	0.977
GYS2	PPP1R3B	ENSMLUP00000005260	ENSMLUP00000014704	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit.	0.978
GYS2	PPP1R3C	ENSMLUP00000005260	ENSMLUP00000016482	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.992
GYS2	PPP1R3E	ENSMLUP00000005260	ENSMLUP00000022024	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3E.	0.974
GYS2	PPP1R3F	ENSMLUP00000005260	ENSMLUP00000005227	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3F.	0.957