STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEGS1Delta 4-desaturase, sphingolipid 1. (323 aa)    
Predicted Functional Partners:
SGMS2
Sphingomyelin synthase 2.
   
 
 0.961
CERS2
Ceramide synthase 2.
   
 0.956
CERS4
Ceramide synthase 4.
   
 0.954
CERS5
Ceramide synthase 5.
    
 0.953
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.952
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.952
KDSR
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.949
SGMS1
Sphingomyelin synthase 1.
   
 
 0.949
SMPD3
Sphingomyelin phosphodiesterase 3.
     
 0.948
SMPD1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.943
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.