TSNAXIP1 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TSNAXIP1

Translin associated factor X interacting protein 1. (710 aa)

Predicted Functional Partners:

ANKEF1

0.913

DNAI1

0.897

DNAH10

0.895

FBXO36

0.890

TEKT3

0.890

ACTR5

0.825

RUVBL1

0.824

ARID4A

0.808

ARID4B

0.808

POLR2D

0.783

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTR5	RUVBL1	ENSMLUP00000008342	ENSMLUP00000003873	Actin related protein 5; Belongs to the actin family.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.999
ACTR5	TSNAXIP1	ENSMLUP00000008342	ENSMLUP00000005337	Actin related protein 5; Belongs to the actin family.	Translin associated factor X interacting protein 1.	0.825
ANKEF1	DNAH10	ENSMLUP00000008194	ENSMLUP00000001217	Ankyrin repeat and EF-hand domain containing 1.	Dynein axonemal heavy chain 10.	0.904
ANKEF1	FBXO36	ENSMLUP00000008194	ENSMLUP00000001264	Ankyrin repeat and EF-hand domain containing 1.	F-box protein 36.	0.890
ANKEF1	TEKT3	ENSMLUP00000008194	ENSMLUP00000002556	Ankyrin repeat and EF-hand domain containing 1.	Tektin 3.	0.918
ANKEF1	TSNAXIP1	ENSMLUP00000008194	ENSMLUP00000005337	Ankyrin repeat and EF-hand domain containing 1.	Translin associated factor X interacting protein 1.	0.913
ARID4A	ARID4B	ENSMLUP00000011258	ENSMLUP00000014805	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.959
ARID4A	RUVBL1	ENSMLUP00000011258	ENSMLUP00000003873	AT-rich interaction domain 4A.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.781
ARID4A	TSNAXIP1	ENSMLUP00000011258	ENSMLUP00000005337	AT-rich interaction domain 4A.	Translin associated factor X interacting protein 1.	0.808
ARID4B	ARID4A	ENSMLUP00000014805	ENSMLUP00000011258	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.959
ARID4B	RUVBL1	ENSMLUP00000014805	ENSMLUP00000003873	AT-rich interaction domain 4B.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.781
ARID4B	TSNAXIP1	ENSMLUP00000014805	ENSMLUP00000005337	AT-rich interaction domain 4B.	Translin associated factor X interacting protein 1.	0.808
DNAH10	ANKEF1	ENSMLUP00000001217	ENSMLUP00000008194	Dynein axonemal heavy chain 10.	Ankyrin repeat and EF-hand domain containing 1.	0.904
DNAH10	DNAI1	ENSMLUP00000001217	ENSMLUP00000004372	Dynein axonemal heavy chain 10.	Dynein axonemal intermediate chain 1.	0.982
DNAH10	FBXO36	ENSMLUP00000001217	ENSMLUP00000001264	Dynein axonemal heavy chain 10.	F-box protein 36.	0.894
DNAH10	TEKT3	ENSMLUP00000001217	ENSMLUP00000002556	Dynein axonemal heavy chain 10.	Tektin 3.	0.896
DNAH10	TSNAXIP1	ENSMLUP00000001217	ENSMLUP00000005337	Dynein axonemal heavy chain 10.	Translin associated factor X interacting protein 1.	0.895
DNAI1	DNAH10	ENSMLUP00000004372	ENSMLUP00000001217	Dynein axonemal intermediate chain 1.	Dynein axonemal heavy chain 10.	0.982
DNAI1	FBXO36	ENSMLUP00000004372	ENSMLUP00000001264	Dynein axonemal intermediate chain 1.	F-box protein 36.	0.890
DNAI1	RUVBL1	ENSMLUP00000004372	ENSMLUP00000003873	Dynein axonemal intermediate chain 1.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.483