STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYS1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)    
Predicted Functional Partners:
ARFRP1
ADP ribosylation factor related protein 1.
   
 
 0.989
VPS52
VPS52 subunit of GARP complex.
     
 0.888
RAB6B
RAB6B, member RAS oncogene family.
     
 0.815
RAB6A
RAB6A, member RAS oncogene family.
     
 0.815
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
     
 0.807
TP53TG5
TP53 target 5.
      
 0.769
PDZK1IP1
PDZK1 interacting protein 1.
      
 0.769
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.752
COG1
Component of oligomeric golgi complex 1.
   
 
 0.748
STX16
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
 0.735
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.