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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP350Centrosomal protein 350. (3122 aa)    
Predicted Functional Partners:
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
  0.945
XRN1
5'-3' exoribonuclease 1.
   
   0.903
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
    0.889
ATAD2B
ATPase family AAA domain containing 2B.
   
 
 0.882
PHIP
Pleckstrin homology domain interacting protein.
   
 
  0.882
BRWD1
Bromodomain and WD repeat domain containing 1.
   
 
  0.880
CEP19
Centrosomal protein 19.
    
 
 0.878
RC3H2
Ring finger and CCCH-type domains 2.
   
    0.829
CCDC186
Coiled-coil domain containing 186.
   
    0.827
UBR1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
    0.826
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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