STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKRIP1PRKR interacting protein 1. (186 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
    
 0.995
SLU7
SLU7 homolog, splicing factor.
   
 0.994
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.973
SDE2
SDE2 telomere maintenance homolog.
    
 0.957
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
   0.941
AQR
RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.
    
   0.940
SYF2
SYF2 pre-mRNA splicing factor.
   
  0.938
FAM32A
Uncharacterized protein.
    
 0.926
G1QFB3_MYOLU
Uncharacterized protein.
    
 0.926
NKAP
NFKB activating protein.
   
 0.917
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.