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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD3RNA pseudouridine synthase D3. (348 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.927
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.915
PUS7
Pseudouridine synthase 7.
   
 
 0.910
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.908
MTG1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.905
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.894
GTPBP8
GTP binding protein 8 (putative).
   
 
 0.890
GTPBP3
GTP binding protein 3, mitochondrial.
  
 
 0.863
MRM1
Mitochondrial rRNA methyltransferase 1.
  
 
 0.863
FASTKD2
FAST kinase domains 2.
   
 
 0.860
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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