STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM1Serine and arginine repetitive matrix 1. (914 aa)    
Predicted Functional Partners:
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.997
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.995
TCERG1
Transcription elongation regulator 1.
   
 0.994
PRPF38A
PRP38_assoc domain-containing protein.
   
 0.992
CDC40
Cell division cycle 40.
    
 0.990
MFAP1
Microfibril associated protein 1.
   
 0.989
PPIL2
Peptidylprolyl isomerase like 2.
    
 0.988
ZMAT2
Zinc finger matrin-type 2.
    
  0.988
UBL5
Ubiquitin like 5.
    
 0.988
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 
 0.987
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.