B4GALT2 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B4GALT2

Beta-1,4-galactosyltransferase 2. (396 aa)

Predicted Functional Partners:

LALBA

0.978

B3GNT3

0.958

B3GNT4

0.949

LOC102418670

0.948

ST6GAL1

0.943

ST6GAL2

0.942

FUT1

0.931

B3GNT5

0.930

FUT8

0.929

FUT9

0.918

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GNT3	B3GNT4	ENSMLUP00000018223	ENSMLUP00000020892	Hexosyltransferase.	Hexosyltransferase.	0.875
B3GNT3	B4GALT2	ENSMLUP00000018223	ENSMLUP00000005831	Hexosyltransferase.	Beta-1,4-galactosyltransferase 2.	0.958
B3GNT3	FUT1	ENSMLUP00000018223	ENSMLUP00000005796	Hexosyltransferase.	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.	0.934
B3GNT3	FUT9	ENSMLUP00000018223	ENSMLUP00000004006	Hexosyltransferase.	Fucosyltransferase 9.	0.954
B3GNT3	LOC102418670	ENSMLUP00000018223	ENSMLUP00000011158	Hexosyltransferase.	Uncharacterized protein.	0.884
B3GNT3	ST6GAL1	ENSMLUP00000018223	ENSMLUP00000013940	Hexosyltransferase.	ST6 beta-galactoside alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.547
B3GNT4	B3GNT3	ENSMLUP00000020892	ENSMLUP00000018223	Hexosyltransferase.	Hexosyltransferase.	0.875
B3GNT4	B3GNT5	ENSMLUP00000020892	ENSMLUP00000015513	Hexosyltransferase.	Hexosyltransferase.	0.470
B3GNT4	B4GALT2	ENSMLUP00000020892	ENSMLUP00000005831	Hexosyltransferase.	Beta-1,4-galactosyltransferase 2.	0.949
B3GNT4	FUT1	ENSMLUP00000020892	ENSMLUP00000005796	Hexosyltransferase.	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.	0.931
B3GNT4	FUT8	ENSMLUP00000020892	ENSMLUP00000004210	Hexosyltransferase.	Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.	0.462
B3GNT4	FUT9	ENSMLUP00000020892	ENSMLUP00000004006	Hexosyltransferase.	Fucosyltransferase 9.	0.899
B3GNT4	LOC102418670	ENSMLUP00000020892	ENSMLUP00000011158	Hexosyltransferase.	Uncharacterized protein.	0.874
B3GNT4	ST6GAL1	ENSMLUP00000020892	ENSMLUP00000013940	Hexosyltransferase.	ST6 beta-galactoside alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.474
B3GNT5	B3GNT4	ENSMLUP00000015513	ENSMLUP00000020892	Hexosyltransferase.	Hexosyltransferase.	0.470
B3GNT5	B4GALT2	ENSMLUP00000015513	ENSMLUP00000005831	Hexosyltransferase.	Beta-1,4-galactosyltransferase 2.	0.930
B3GNT5	FUT1	ENSMLUP00000015513	ENSMLUP00000005796	Hexosyltransferase.	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.	0.710
B3GNT5	FUT9	ENSMLUP00000015513	ENSMLUP00000004006	Hexosyltransferase.	Fucosyltransferase 9.	0.467
B3GNT5	LOC102418670	ENSMLUP00000015513	ENSMLUP00000011158	Hexosyltransferase.	Uncharacterized protein.	0.628
B4GALT2	B3GNT3	ENSMLUP00000005831	ENSMLUP00000018223	Beta-1,4-galactosyltransferase 2.	Hexosyltransferase.	0.958