STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAL1TAL bHLH transcription factor 1, erythroid differentiation factor. (184 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.999
LMO2
LIM domain only 2.
   
 0.998
TCF12
Transcription factor 12.
    
 0.970
TCF3
Transcription factor 3.
    
 0.970
TCF4
Transcription factor 4.
    
 0.970
LDB2
LIM domain binding 2.
    
 0.964
GATA2
GATA binding protein 2.
   
 0.945
RUNX1
Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.
    
 0.923
G1NZ27_MYOLU
GATA-type domain-containing protein.
   
 0.896
G1PCU7_MYOLU
GATA-type domain-containing protein.
   
 0.896
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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