STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF1SH3 domain containing ring finger 1. (888 aa)    
Predicted Functional Partners:
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.763
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
    
 
 0.758
RHOU
Ras homolog family member U.
    
  0.758
IFRD2
Interferon related developmental regulator 2.
      
 0.746
RAC1
Rac family small GTPase 1.
    
  0.719
RAC2
Rac family small GTPase 2.
    
  0.719
MAP3K11
Mitogen-activated protein kinase kinase kinase.
    
 0.718
CDC42
Cell division cycle 42.
    
 0.715
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
      
 0.708
SYNRG
Synergin gamma.
    
 
 0.696
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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