STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX41DEAD-box helicase 41. (622 aa)    
Predicted Functional Partners:
TRIM21
Tripartite motif containing 21.
    
 0.987
CDC40
Cell division cycle 40.
    
 0.964
SRRM1
Serine and arginine repetitive matrix 1.
    
  0.962
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
     
 0.954
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.937
DHX9
DExH-box helicase 9.
    
 0.873
DHX36
DEAH-box helicase 36.
   
 0.872
TBK1
TANK binding kinase 1.
    
 0.850
NKAP
NFKB activating protein.
    
  0.841
G1Q8N0_MYOLU
Nkap_C domain-containing protein.
    
  0.841
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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