STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD1Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (745 aa)    
Predicted Functional Partners:
NSD1
Nuclear receptor binding SET domain protein 1.
    
 0.957
PLOD2
Uncharacterized protein.
  
0.947
G1QFQ8_MYOLU
Fe2OG dioxygenase domain-containing protein.
  
0.947
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
  
0.943
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
   
0.914
G1Q657_MYOLU
Uncharacterized protein.
    
 0.914
COLGALT2
Uncharacterized protein.
   
0.912
LOC102433357
Uncharacterized protein.
   
 0.912
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
  0.910
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 0.908
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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