Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HMGB1 | LY96 | ENSMLUP00000017918 | ENSMLUP00000014497 | Uncharacterized protein. | Lymphocyte antigen 96. | 0.982 |
HMGB1 | MYD88 | ENSMLUP00000017918 | ENSMLUP00000010679 | Uncharacterized protein. | MYD88 innate immune signal transduction adaptor. | 0.737 |
HMGB1 | TIRAP | ENSMLUP00000017918 | ENSMLUP00000015809 | Uncharacterized protein. | TIR domain containing adaptor protein. | 0.585 |
HMGB1 | TLR4 | ENSMLUP00000017918 | ENSMLUP00000006762 | Uncharacterized protein. | Toll like receptor 4; Belongs to the Toll-like receptor family. | 0.995 |
HMGB1 | TLR6 | ENSMLUP00000017918 | ENSMLUP00000007678 | Uncharacterized protein. | Toll like receptor 6; Belongs to the Toll-like receptor family. | 0.846 |
IKBKG | LY96 | ENSMLUP00000020553 | ENSMLUP00000014497 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | Lymphocyte antigen 96. | 0.683 |
IKBKG | MAP3K7 | ENSMLUP00000020553 | ENSMLUP00000003040 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily. | 0.999 |
IKBKG | MYD88 | ENSMLUP00000020553 | ENSMLUP00000010679 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | MYD88 innate immune signal transduction adaptor. | 0.995 |
IKBKG | TICAM1 | ENSMLUP00000020553 | ENSMLUP00000019506 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | TIR domain-containing adapter molecule 1; Involved in innate immunity against invading pathogens. Component of a multi-helicase-TICAM1 complex that acts as a cytoplasmic sensor of viral double-stranded RNA (dsRNA) and plays a role in the activation of a cascade of antiviral responses including the induction of proinflammatory cytokines. | 0.570 |
IKBKG | TIRAP | ENSMLUP00000020553 | ENSMLUP00000015809 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | TIR domain containing adaptor protein. | 0.446 |
IKBKG | TLR4 | ENSMLUP00000020553 | ENSMLUP00000006762 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | Toll like receptor 4; Belongs to the Toll-like receptor family. | 0.994 |
IKBKG | TLR6 | ENSMLUP00000020553 | ENSMLUP00000007678 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | Toll like receptor 6; Belongs to the Toll-like receptor family. | 0.657 |
IKBKG | TRAF3 | ENSMLUP00000020553 | ENSMLUP00000008817 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.942 |
IKBKG | TRAF6 | ENSMLUP00000020553 | ENSMLUP00000003284 | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.999 |
LY96 | HMGB1 | ENSMLUP00000014497 | ENSMLUP00000017918 | Lymphocyte antigen 96. | Uncharacterized protein. | 0.982 |
LY96 | IKBKG | ENSMLUP00000014497 | ENSMLUP00000020553 | Lymphocyte antigen 96. | Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. | 0.683 |
LY96 | MAP3K7 | ENSMLUP00000014497 | ENSMLUP00000003040 | Lymphocyte antigen 96. | Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily. | 0.737 |
LY96 | MYD88 | ENSMLUP00000014497 | ENSMLUP00000010679 | Lymphocyte antigen 96. | MYD88 innate immune signal transduction adaptor. | 0.972 |
LY96 | TICAM1 | ENSMLUP00000014497 | ENSMLUP00000019506 | Lymphocyte antigen 96. | TIR domain-containing adapter molecule 1; Involved in innate immunity against invading pathogens. Component of a multi-helicase-TICAM1 complex that acts as a cytoplasmic sensor of viral double-stranded RNA (dsRNA) and plays a role in the activation of a cascade of antiviral responses including the induction of proinflammatory cytokines. | 0.717 |
LY96 | TIRAP | ENSMLUP00000014497 | ENSMLUP00000015809 | Lymphocyte antigen 96. | TIR domain containing adaptor protein. | 0.955 |
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