STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (793 aa)    
Predicted Functional Partners:
TMEM215
Transmembrane protein 215.
   
    0.890
CTNNB1
Catenin beta 1.
    
 0.852
CTNND1
Catenin delta 1.
   
 0.802
JUP
Junction plakoglobin.
    
 0.797
ARVCF
ARVCF delta catenin family member.
   
 0.780
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.769
G1PJ95_MYOLU
Uncharacterized protein.
    
 0.758
G1PXW8_MYOLU
Uncharacterized protein.
    
 0.758
TELO2
Telomere maintenance 2.
    
 
 0.751
CTNND2
Catenin delta 2.
   
 0.744
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.