MYOD1 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EP300	G1NXF1_MYOLU	ENSMLUP00000013493	ENSMLUP00000002043	E1A binding protein p300.	Uncharacterized protein.	0.434
EP300	ID1	ENSMLUP00000013493	ENSMLUP00000019722	E1A binding protein p300.	Inhibitor of DNA binding 1, HLH protein.	0.590
EP300	MEF2A	ENSMLUP00000013493	ENSMLUP00000014968	E1A binding protein p300.	Myocyte enhancer factor 2A.	0.957
EP300	MEF2C	ENSMLUP00000013493	ENSMLUP00000007513	E1A binding protein p300.	Myocyte enhancer factor 2C.	0.951
EP300	MYOD1	ENSMLUP00000013493	ENSMLUP00000007248	E1A binding protein p300.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.977
EP300	MYOG	ENSMLUP00000013493	ENSMLUP00000014692	E1A binding protein p300.	Myogenin.	0.656
EP300	TCF12	ENSMLUP00000013493	ENSMLUP00000005682	E1A binding protein p300.	Transcription factor 12.	0.896
EP300	TCF3	ENSMLUP00000013493	ENSMLUP00000010231	E1A binding protein p300.	Transcription factor 3.	0.970
EP300	TCF4	ENSMLUP00000013493	ENSMLUP00000011764	E1A binding protein p300.	Transcription factor 4.	0.896
FBXO32	MYOD1	ENSMLUP00000012029	ENSMLUP00000007248	F-box protein 32.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.981
FBXO32	MYOG	ENSMLUP00000012029	ENSMLUP00000014692	F-box protein 32.	Myogenin.	0.811
G1NXF1_MYOLU	EP300	ENSMLUP00000002043	ENSMLUP00000013493	Uncharacterized protein.	E1A binding protein p300.	0.434
G1NXF1_MYOLU	MEF2A	ENSMLUP00000002043	ENSMLUP00000014968	Uncharacterized protein.	Myocyte enhancer factor 2A.	0.549
G1NXF1_MYOLU	MEF2C	ENSMLUP00000002043	ENSMLUP00000007513	Uncharacterized protein.	Myocyte enhancer factor 2C.	0.585
G1NXF1_MYOLU	MYOD1	ENSMLUP00000002043	ENSMLUP00000007248	Uncharacterized protein.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.955
G1NXF1_MYOLU	MYOG	ENSMLUP00000002043	ENSMLUP00000014692	Uncharacterized protein.	Myogenin.	0.864
ID1	EP300	ENSMLUP00000019722	ENSMLUP00000013493	Inhibitor of DNA binding 1, HLH protein.	E1A binding protein p300.	0.590
ID1	MYOD1	ENSMLUP00000019722	ENSMLUP00000007248	Inhibitor of DNA binding 1, HLH protein.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.968
ID1	MYOG	ENSMLUP00000019722	ENSMLUP00000014692	Inhibitor of DNA binding 1, HLH protein.	Myogenin.	0.843
ID1	TCF12	ENSMLUP00000019722	ENSMLUP00000005682	Inhibitor of DNA binding 1, HLH protein.	Transcription factor 12.	0.908