STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf47Chromosome 6 open reading frame 47. (314 aa)    
Predicted Functional Partners:
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.681
LY6G5C
Lymphocyte antigen 6 family member G5C.
      
 0.678
LY6G5B
Lymphocyte antigen 6 family member G5B.
      
 0.641
ABT1
Activator of basal transcription 1.
      
 0.612
TFAP2D
Transcription factor AP-2 delta.
      
 0.612
ABHD16A
Abhydrolase domain containing 16A.
      
 0.612
PRRC2A
Proline rich coiled-coil 2A.
      
 0.574
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.487
CRISP1
Cysteine rich secretory protein 1; Belongs to the CRISP family.
      
 0.487
APOM
Apolipoprotein M.
      
 0.485
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.