TRIP6 protein (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TRIP6

Thyroid hormone receptor interactor 6. (484 aa)

Predicted Functional Partners:

HAUS1

0.892

HAUS3

0.892

RIPK2

0.883

HAUS8

0.844

RBM42

0.827

HAUS5

0.827

FLNA

0.805

SAV1

0.804

HAUS7

0.795

EVL

0.794

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EVL	TRIP6	ENSMLUP00000009828	ENSMLUP00000009069	Enah/Vasp-like; Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance, lamellipodial and filopodial dynamics, platelet activation and cell migration. Belongs to the Ena/VASP family.	Thyroid hormone receptor interactor 6.	0.794
FLNA	TRIP6	ENSMLUP00000013037	ENSMLUP00000009069	Filamin A.	Thyroid hormone receptor interactor 6.	0.805
HAUS1	HAUS3	ENSMLUP00000009009	ENSMLUP00000017417	HAUS augmin like complex subunit 1.	HAUS augmin like complex subunit 3.	0.999
HAUS1	HAUS5	ENSMLUP00000009009	ENSMLUP00000014727	HAUS augmin like complex subunit 1.	HAUS augmin like complex subunit 5.	0.998
HAUS1	HAUS7	ENSMLUP00000009009	ENSMLUP00000009610	HAUS augmin like complex subunit 1.	Uncharacterized protein.	0.998
HAUS1	HAUS8	ENSMLUP00000009009	ENSMLUP00000013055	HAUS augmin like complex subunit 1.	HAUS augmin like complex subunit 8.	0.999
HAUS1	RBM42	ENSMLUP00000009009	ENSMLUP00000010326	HAUS augmin like complex subunit 1.	RNA binding motif protein 42.	0.974
HAUS1	TRIP6	ENSMLUP00000009009	ENSMLUP00000009069	HAUS augmin like complex subunit 1.	Thyroid hormone receptor interactor 6.	0.892
HAUS3	HAUS1	ENSMLUP00000017417	ENSMLUP00000009009	HAUS augmin like complex subunit 3.	HAUS augmin like complex subunit 1.	0.999
HAUS3	HAUS5	ENSMLUP00000017417	ENSMLUP00000014727	HAUS augmin like complex subunit 3.	HAUS augmin like complex subunit 5.	0.999
HAUS3	HAUS7	ENSMLUP00000017417	ENSMLUP00000009610	HAUS augmin like complex subunit 3.	Uncharacterized protein.	0.999
HAUS3	HAUS8	ENSMLUP00000017417	ENSMLUP00000013055	HAUS augmin like complex subunit 3.	HAUS augmin like complex subunit 8.	0.999
HAUS3	RBM42	ENSMLUP00000017417	ENSMLUP00000010326	HAUS augmin like complex subunit 3.	RNA binding motif protein 42.	0.980
HAUS3	TRIP6	ENSMLUP00000017417	ENSMLUP00000009069	HAUS augmin like complex subunit 3.	Thyroid hormone receptor interactor 6.	0.892
HAUS5	HAUS1	ENSMLUP00000014727	ENSMLUP00000009009	HAUS augmin like complex subunit 5.	HAUS augmin like complex subunit 1.	0.998
HAUS5	HAUS3	ENSMLUP00000014727	ENSMLUP00000017417	HAUS augmin like complex subunit 5.	HAUS augmin like complex subunit 3.	0.999
HAUS5	HAUS7	ENSMLUP00000014727	ENSMLUP00000009610	HAUS augmin like complex subunit 5.	Uncharacterized protein.	0.999
HAUS5	HAUS8	ENSMLUP00000014727	ENSMLUP00000013055	HAUS augmin like complex subunit 5.	HAUS augmin like complex subunit 8.	0.999
HAUS5	TRIP6	ENSMLUP00000014727	ENSMLUP00000009069	HAUS augmin like complex subunit 5.	Thyroid hormone receptor interactor 6.	0.827
HAUS7	HAUS1	ENSMLUP00000009610	ENSMLUP00000009009	Uncharacterized protein.	HAUS augmin like complex subunit 1.	0.998