Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID3B | HMGA1 | ENSMLUP00000012068 | ENSMLUP00000009196 | AT-rich interaction domain 3B. | High mobility group AT-hook 1. | 0.627 |
CABIN1 | HIRA | ENSMLUP00000010937 | ENSMLUP00000002225 | Calcineurin binding protein 1. | Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.997 |
CABIN1 | HMGA1 | ENSMLUP00000010937 | ENSMLUP00000009196 | Calcineurin binding protein 1. | High mobility group AT-hook 1. | 0.648 |
CABIN1 | RPS10-NUDT3 | ENSMLUP00000010937 | ENSMLUP00000006834 | Calcineurin binding protein 1. | RPS10-NUDT3 readthrough. | 0.553 |
G1PWU2_MYOLU | HMGA1 | ENSMLUP00000015882 | ENSMLUP00000009196 | Uncharacterized protein. | High mobility group AT-hook 1. | 0.961 |
G1Q234_MYOLU | HMGA1 | ENSMLUP00000017767 | ENSMLUP00000009196 | BZIP domain-containing protein; Belongs to the bZIP family. | High mobility group AT-hook 1. | 0.665 |
HIRA | CABIN1 | ENSMLUP00000002225 | ENSMLUP00000010937 | Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Calcineurin binding protein 1. | 0.997 |
HIRA | HMGA1 | ENSMLUP00000002225 | ENSMLUP00000009196 | Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | High mobility group AT-hook 1. | 0.648 |
HMGA1 | ARID3B | ENSMLUP00000009196 | ENSMLUP00000012068 | High mobility group AT-hook 1. | AT-rich interaction domain 3B. | 0.627 |
HMGA1 | CABIN1 | ENSMLUP00000009196 | ENSMLUP00000010937 | High mobility group AT-hook 1. | Calcineurin binding protein 1. | 0.648 |
HMGA1 | G1PWU2_MYOLU | ENSMLUP00000009196 | ENSMLUP00000015882 | High mobility group AT-hook 1. | Uncharacterized protein. | 0.961 |
HMGA1 | G1Q234_MYOLU | ENSMLUP00000009196 | ENSMLUP00000017767 | High mobility group AT-hook 1. | BZIP domain-containing protein; Belongs to the bZIP family. | 0.665 |
HMGA1 | HIRA | ENSMLUP00000009196 | ENSMLUP00000002225 | High mobility group AT-hook 1. | Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.648 |
HMGA1 | MYBL1 | ENSMLUP00000009196 | ENSMLUP00000002886 | High mobility group AT-hook 1. | MYB proto-oncogene like 1. | 0.772 |
HMGA1 | RGR | ENSMLUP00000009196 | ENSMLUP00000015474 | High mobility group AT-hook 1. | Retinal G protein coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. | 0.621 |
HMGA1 | RPS10-NUDT3 | ENSMLUP00000009196 | ENSMLUP00000006834 | High mobility group AT-hook 1. | RPS10-NUDT3 readthrough. | 0.612 |
HMGA1 | SPDEF | ENSMLUP00000009196 | ENSMLUP00000019834 | High mobility group AT-hook 1. | SAM pointed domain containing ETS transcription factor. | 0.631 |
HMGA1 | TCEAL5 | ENSMLUP00000009196 | ENSMLUP00000012957 | High mobility group AT-hook 1. | Uncharacterized protein. | 0.705 |
MYBL1 | HMGA1 | ENSMLUP00000002886 | ENSMLUP00000009196 | MYB proto-oncogene like 1. | High mobility group AT-hook 1. | 0.772 |
MYBL1 | SPDEF | ENSMLUP00000002886 | ENSMLUP00000019834 | MYB proto-oncogene like 1. | SAM pointed domain containing ETS transcription factor. | 0.567 |
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