STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGA1High mobility group AT-hook 1. (107 aa)    
Predicted Functional Partners:
G1PWU2_MYOLU
Uncharacterized protein.
   
 
 0.961
MYBL1
MYB proto-oncogene like 1.
   
  
 0.772
TCEAL5
Uncharacterized protein.
      
 0.705
G1Q234_MYOLU
BZIP domain-containing protein; Belongs to the bZIP family.
    
 
 0.665
HIRA
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
  0.648
CABIN1
Calcineurin binding protein 1.
    
  0.648
SPDEF
SAM pointed domain containing ETS transcription factor.
      
 0.631
ARID3B
AT-rich interaction domain 3B.
      
 0.627
RGR
Retinal G protein coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
      
 0.621
RPS10-NUDT3
RPS10-NUDT3 readthrough.
      
 0.612
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
Server load: low (28%) [HD]