STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM9Uncharacterized protein. (465 aa)    
Predicted Functional Partners:
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.855
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
 0.853
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
     
 0.843
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.834
KMT5A
Lysine methyltransferase 5A.
   
 0.830
PLOD2
Uncharacterized protein.
     
 0.822
G1QFQ8_MYOLU
Fe2OG dioxygenase domain-containing protein.
     
 0.822
G1Q6C8_MYOLU
Uncharacterized protein.
   
 0.799
LOC102424991
Uncharacterized protein.
   
 0.798
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 0.792
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.