STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCA5Lebercilin LCA5. (686 aa)    
Predicted Functional Partners:
G1PZQ6_MYOLU
Uncharacterized protein.
    
  0.818
WDR90
WD repeat domain 90.
    
   0.798
TRIO
Trio Rho guanine nucleotide exchange factor.
    
  0.674
KALRN
Kalirin RhoGEF kinase.
    
  0.674
GABBR1
Gamma-aminobutyric acid type B receptor subunit 1; Belongs to the G-protein coupled receptor 3 family.
    
 0.667
GABBR2
Gamma-aminobutyric acid type B receptor subunit 2.
    
 0.667
GNG13
G protein subunit gamma 13.
    
 0.634
NME8
NME/NM23 family member 8.
    
 
 0.632
EFHB
EF-hand domain family member B.
   
   0.619
PACRG
Parkin coregulated.
   
 
 0.599
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.