STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (444 aa)    
Predicted Functional Partners:
VTA1
Vesicle trafficking 1.
   
 0.999
CHMP2B
Charged multivesicular body protein 2B.
   
 0.996
CHMP2A
Charged multivesicular body protein 2A.
    
 0.996
CHMP4C
Charged multivesicular body protein 4C.
    
 0.993
CHMP1A
Charged multivesicular body protein 1A.
   
 0.992
CHMP5
Charged multivesicular body protein 5.
   
 0.991
G1P7A0_MYOLU
Uncharacterized protein; Belongs to the AAA ATPase family.
  
 
0.990
CHMP4B
Charged multivesicular body protein 4B.
    
 0.989
LOC102441363
Uncharacterized protein.
   
 0.988
C17orf75
Chromosome 17 open reading frame 75.
    
 0.986
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.