STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDP2Tyrosyl-DNA phosphodiesterase 2. (361 aa)    
Predicted Functional Partners:
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 
 0.783
LOC102420450
Ubiquitin-like domain-containing protein.
    
 
 0.745
G1Q2S7_MYOLU
Ubiquitin-like domain-containing protein.
    
 
 0.745
G1QC31_MYOLU
Ubiquitin-like domain-containing protein.
    
 
 0.745
G1QDQ7_MYOLU
Ubiquitin-like domain-containing protein.
    
 
 0.745
G1PYD9_MYOLU
Ubiquitin-like domain-containing protein.
    
   0.734
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.734
G1Q7W4_MYOLU
Ubiquitin-like domain-containing protein.
    
   0.734
LOC102430695
Ubiquitin-like domain-containing protein.
    
   0.734
G1QGB2_MYOLU
Ubiquitin-like domain-containing protein.
    
   0.734
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.