STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMO1Vitelline membrane outer layer 1 homolog. (190 aa)    
Predicted Functional Partners:
CHID1
Chitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.753
G1PZQ6_MYOLU
Uncharacterized protein.
   
 0.739
ARHGEF5
Rho guanine nucleotide exchange factor 5.
      
 0.681
NEK11
NIMA related kinase 11.
      
 0.681
SPEF1
Sperm flagellar 1.
   
 
 0.677
TMEM252
Transmembrane protein 252.
      
 0.677
WSCD1
WSC domain containing 1.
    
 0.655
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
     
 0.651
GRAMD2A
GRAM domain containing 2A.
    
 
 0.645
G1P510_MYOLU
AMP-binding domain-containing protein.
    
 0.642
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.