STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMNDC1Survival motor neuron domain containing 1. (238 aa)    
Predicted Functional Partners:
PHF5A
PHD finger protein 5A.
     
 0.976
DDX46
DEAD-box helicase 46.
   
 
 0.976
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
     
 0.974
LOC102439237
Uncharacterized protein.
   
 0.970
G1PLV7_MYOLU
Uncharacterized protein.
   
 0.970
U2SURP
Uncharacterized protein.
    
  0.968
G1Q8M8_MYOLU
Uncharacterized protein.
    
  0.968
SNRPB2
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.965
G1NXJ2_MYOLU
G-patch domain-containing protein.
   
 
  0.964
LOC102422245
G-patch domain-containing protein.
   
 
  0.964
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.