STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD1Chromodomain helicase DNA binding protein 1. (1694 aa)    
Predicted Functional Partners:
G1PZ42_MYOLU
YL1_C domain-containing protein.
    
 0.869
INO80C
YL1_C domain-containing protein.
    
 0.869
ARID4A
AT-rich interaction domain 4A.
   
 0.846
RANBP2
RAN binding protein 2.
  
  0.843
ARID4B
AT-rich interaction domain 4B.
   
 0.842
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.830
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.827
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.825
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.824
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.823
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.