STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOVA1NOVA alternative splicing regulator 1. (417 aa)    
Predicted Functional Partners:
PTBP2
Polypyrimidine tract binding protein 2.
    
 
 0.631
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.629
TREM2
Triggering receptor expressed on myeloid cells 2.
   
  
 0.594
CELF4
CUGBP Elav-like family member 4.
      
 0.571
CELF3
CUGBP Elav-like family member 3.
      
 0.571
NTN1
Netrin 1.
      
 0.571
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
      
 0.570
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
      
 0.570
DNM1
Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.492
SFSWAP
Splicing factor SWAP.
      
 0.487
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.