STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK1VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. (396 aa)    
Predicted Functional Partners:
ANKLE2
Ankyrin repeat and LEM domain containing 2.
   
 0.980
LTV1
LTV1 ribosome biogenesis factor.
    
 0.925
G1P6Z6_MYOLU
Uncharacterized protein.
    
 0.902
BANF1
Barrier to autointegration factor 1.
    
 0.902
G1Q3B4_MYOLU
Uncharacterized protein.
    
 0.902
BYSL
Bystin like.
    
 0.869
RIOK2
RIO kinase 2.
    
 0.867
TSR1
TSR1 ribosome maturation factor.
    
 0.838
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.811
PER1
Period circadian regulator 1.
    
 0.798
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.