STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QL1C1q domain-containing protein. (128 aa)    
Predicted Functional Partners:
TEP1
Telomerase associated protein 1.
    
 0.700
CDH9
Cadherin 9; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.682
GPR158
G protein-coupled receptor 158.
      
 0.676
LSAMP
Limbic system associated membrane protein.
    
 
 0.671
G1PZQ6_MYOLU
Uncharacterized protein.
    
  0.671
PDZD11
PDZ domain containing 11.
    
 
 0.651
CDHR1
Cadherin related family member 1.
      
 0.611
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 
 0.608
MED31
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.591
COL8A1
Collagen type VIII alpha 1 chain.
   
 
0.580
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.